CDS

Accession Number TCMCG057C56707
gbkey CDS
Protein Id XP_018462842.1
Location complement(join(5516..5754,5839..6244,6327..6407,6488..6547,6630..6854,6943..7137,7247..7364,7455..7837,8155..8640))
Gene LOC108833960
GeneID 108833960
Organism Raphanus sativus

Protein

Length 730aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018607340.1
Definition PREDICTED: glycine--tRNA ligase, mitochondrial 1-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category J
Description glycine-tRNA ligase
KEGG_TC -
KEGG_Module M00359        [VIEW IN KEGG]
M00360        [VIEW IN KEGG]
KEGG_Reaction R03654        [VIEW IN KEGG]
KEGG_rclass RC00055        [VIEW IN KEGG]
RC00523        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01007        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
KEGG_ko ko:K01880        [VIEW IN KEGG]
EC 6.1.1.14        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00970        [VIEW IN KEGG]
map00970        [VIEW IN KEGG]
GOs GO:0000959        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004812        [VIEW IN EMBL-EBI]
GO:0004820        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0005768        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005802        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006418        [VIEW IN EMBL-EBI]
GO:0006426        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006520        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006753        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009117        [VIEW IN EMBL-EBI]
GO:0009165        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010038        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015959        [VIEW IN EMBL-EBI]
GO:0015960        [VIEW IN EMBL-EBI]
GO:0015965        [VIEW IN EMBL-EBI]
GO:0015966        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016874        [VIEW IN EMBL-EBI]
GO:0016875        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019637        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0032543        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043038        [VIEW IN EMBL-EBI]
GO:0043039        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044431        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046686        [VIEW IN EMBL-EBI]
GO:0046983        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0055086        [VIEW IN EMBL-EBI]
GO:0070127        [VIEW IN EMBL-EBI]
GO:0070150        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090407        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098791        [VIEW IN EMBL-EBI]
GO:0140053        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140101        [VIEW IN EMBL-EBI]
GO:1901293        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCGCTTTCTCTCTCCACTTGGCTCAACACGCAGACAAATCTTCTTCTATCTTCTCCCTCAATTTCAAGCCAACTCGATCCGTCGCGAATCTACCTCATCGTTCCACACCACGATGGACGCCACCGAACAATCTCTCCGCCAATCTCTCTCGGAGAAATCCTCCTCCGTCGAGTCCCAGGGCAACGCCGTACGCGCTCTCAAGGCCTCCCGCGCAGCGAAGCCCGAGATCGACGCCGCCATCGACCTCCTCAACAAACTCAAGCTCGAGAAATCCGCCGTGGAGAAGCAGCTCCAGTCGACCATAAGCAGCTCCGGAAACGGTTCGCTCAACCGCGAGGCGTTCCGGCAAGCCGTGGTGAATACTCTGGAGCGGCGTTTGTTCTACATCCCTTCGTTTAAGATCTACCGCGGTGTAGCTGGGCTCTTCGATTACGGTCCTCCTGGCTGCGCTGTCAAGTCCAATGTTCTTAGCTTCTGGCGTCAACATTTCATTCTTGAGGAGAACATGCTTGAAGTTGATTGTCCATGTGTGACACCGGAGGTTGTACTCAAGGCGTCTGGGCATGTTGATAAGTTCACTGATCTTATGGTCAAGGATGAGAAAACAGGGACGTGTTATCGTGCGGATCACTTGCTGAAAGACTACTGCACCGAGAAGCTGGAGAAAGATCTTACCATCTCTGCTGAGAAAGCTGCTGAGTTTAAGGATGTTCTTGCTGTTATGGAAGATTATTCCCCTGAAGAGCTTGGTGCTAAGATCAAGGAGTATGGGATCACTGCTCCAGATACTAAGAACCCTCTTTCTGATCCTTATCCGTTTAACTTGATGTTTCAAACATCCATTGGCCCATCTGGTTTGATTCCTGGTTACATGCGTCCGGAGACTGCACAAGGCATATTTGTGAATTTCAAGGACTTGTATTATTACAATGGGAGAAAACTTCCTTTTGCTGCTGCTCAAATTGGTCAAGCCTTTAGAAACGAGATTTCTCCTCGTCAGGGGCTTCTTAGAGTTCGTGAATTCACTCTGGCTGAGATTGAACACTTTGTTGATCCTGAGAACAAGTCCCACCCTAAATTCTCTGATGTATCAAAACTGGAGTTCCTCATGTTTCCAAGAGAAGAACAAATGTCTGGCCAAGCTGCTAAAAAACTTTGCCTTGGCGAAGCTGTTGCCAAGGGAACTGTGAACAATGAAACTCTAGGGTACTTCATTGGAAGAGTTTATCTTTTCCTTACCCGCCTTGGCATAGACAAGGAACGGCTGCGTTTCCGCCAGCATCTAGCTAATGAAATGGCCCACTATGCAGCAGATTGTTGGGATGCTGAAATTGAGAGTTCATACGGATGGATTGAGTGTGTTGGCATTGCAGATAGGTCTGCTTACGACCTACGTGCTCACTCGGATAAAAGTGGCGTTGCTCTTGTAGCTGAAGAGAAATATGCAGAGCCTAAAGAAGTAGAGAAACTTGTGATCAATCCTGTGAAGAAAGAACTGGGCCTTGCATTCAAGGGAAATCAGAAGAATGTTGTTGAATCTTTGGAGGCGATGAACGAGAAAGAAGCTATGGAGATGAAGGCAACCCTGGAATCCAAGGGGGAAGTGGAGTTCTACGTGTGTACCCTCGGGAAAAACGTGAGCATCAAGAAGAACATGGTGTCAATCTCAAAGGAGAAGAAGAAAGAGCACCAGCGTGTTTTCACACCGTCAGTGATCGAACCATCTTTCGGGATTGGTCGGATCATATATTGTCTGTACGAGCACTGTTTCAGCACAAGACCAAGCAAAGCAGGGGATGAACAGCTGAACGTGTTCCGGTTCCCTCCTCTTGTGGCTCCCATCAAGTGCACGGTTTTCCCGCTGGTTCAGAACCAACAATTCGAGGAAGCAACCAAAGTCATTTCCAAGGAACTCACTTCTGTTGGCATCTCGCATAAGATTGACATCACTGGTACATCGATAGGGAAAAGGTATGCGAGAACGGATGAGCTAGGAGTGCCATTTGCAATAACAGTGGACTCGGATGCATCGGTGACAATCAGAGAAAGAGACAGCAAAGACCAAGTCCGAGTTAGCTTGAAAGAGGCAGCCTCTGTGGTGAGCTCAGTCGCGGAGGGGAAGATGACATGGCAAGACGTGTGGGCAAGCTTCCCTCACCACTCTTCTGCTGCTGCAGACGAGCAGGAGTGA
Protein:  
MRFLSPLGSTRRQIFFYLLPQFQANSIRRESTSSFHTTMDATEQSLRQSLSEKSSSVESQGNAVRALKASRAAKPEIDAAIDLLNKLKLEKSAVEKQLQSTISSSGNGSLNREAFRQAVVNTLERRLFYIPSFKIYRGVAGLFDYGPPGCAVKSNVLSFWRQHFILEENMLEVDCPCVTPEVVLKASGHVDKFTDLMVKDEKTGTCYRADHLLKDYCTEKLEKDLTISAEKAAEFKDVLAVMEDYSPEELGAKIKEYGITAPDTKNPLSDPYPFNLMFQTSIGPSGLIPGYMRPETAQGIFVNFKDLYYYNGRKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVDPENKSHPKFSDVSKLEFLMFPREEQMSGQAAKKLCLGEAVAKGTVNNETLGYFIGRVYLFLTRLGIDKERLRFRQHLANEMAHYAADCWDAEIESSYGWIECVGIADRSAYDLRAHSDKSGVALVAEEKYAEPKEVEKLVINPVKKELGLAFKGNQKNVVESLEAMNEKEAMEMKATLESKGEVEFYVCTLGKNVSIKKNMVSISKEKKKEHQRVFTPSVIEPSFGIGRIIYCLYEHCFSTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQFEEATKVISKELTSVGISHKIDITGTSIGKRYARTDELGVPFAITVDSDASVTIRERDSKDQVRVSLKEAASVVSSVAEGKMTWQDVWASFPHHSSAAADEQE